BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E03LP1|AL426040
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1532 0.0
>3x_Contig1741
Length = 21706
Score = 1532 bits (773), Expect = 0.0
Identities = 818/833 (98%)
Strand = Plus / Plus
Query: 29 tggtgaagatgacgatgatttgtacagttagatacataaccttcacaaaacataacaggt 88
|||||||||||||||||||||||| ||||||||| |||| | | |||| |||| |||
Sbjct: 197 tggtgaagatgacgatgatttgtaaagttagataaataaaataaaaaaaaaataaaagga 256
Query: 89 ctttttcgatgcaaaatgaaatgtaataaattacaatacagaggaatacttgttgctaaa 148
|||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 attttaagaagaaaaatgaaatgtaataaattacaatacagaggaatacttgttgctaaa 316
Query: 149 tttacgtagagattaaatattatctattaatcacgtgtaacaggatatttgagataactg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tttacgtagagattaaatattatctattaatcacgtgtaacaggatatttgagataactg 376
Query: 209 gttttaatatggttaaaagattcatcagtcttagctatcccttccaattttgggtcttga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gttttaatatggttaaaagattcatcagtcttagctatcccttccaattttgggtcttga 436
Query: 269 attcatctttaattcgacctagtagtgcaatggtatattttcgccaggcaaagcaataca 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 attcatctttaattcgacctagtagtgcaatggtatattttcgccaggcaaagcaataca 496
Query: 329 gggtctccgaagtaaaaccaaattatattaatgaatacatatatgtgcgagagtatgtac 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gggtctccgaagtaaaaccaaattatattaatgaatacatatatgtgcgagagtatgtac 556
Query: 389 gtttgaatgaaatagaaagttgagagaaagaaatgcaaataccaaatagtcacctacgtg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtttgaatgaaatagaaagttgagagaaagaaatgcaaataccaaatagtcacctacgtg 616
Query: 449 cttcaatgtgttggcaatccgtccgttaatggaatatcgaagcccagcctgactttgaag 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cttcaatgtgttggcaatccgtccgttaatggaatatcgaagcccagcctgactttgaag 676
Query: 509 atatattatttgtgtttgtgactgcatgtgcaggcaatgctttaaagtccgtacaagact 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atatattatttgtgtttgtgactgcatgtgcaggcaatgctttaaagtccgtacaagact 736
Query: 569 tagaattcaacataataggcttcgttagaccaaatttcttccttggtgtgacctttgcgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tagaattcaacataataggcttcgttagaccaaatttcttccttggtgtgacctttgcgg 796
Query: 629 atggctcctcactgataactttcagtttgctttgggataaagacgaaccagaagatgagg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atggctcctcactgataactttcagtttgctttgggataaagacgaaccagaagatgagg 856
Query: 689 acgagccagaagatgatgaatatgctagtgacgatgacgaagaagccatcgagtctattg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 acgagccagaagatgatgaatatgctagtgacgatgacgaagaagccatcgagtctattg 916
Query: 749 tagacaatgtgttcgatgaagacaaagaggggatcgacatgtgagatgacgaccttgaat 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tagacaatgtgttcgatgaagacaaagaggggatcgacatgtgagatgacgaccttgaat 976
Query: 809 gcgcttctgtattgaggaaattttttgtttgcccactcactggtgcgttgaat 861
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gcgcttctgtattgaggaaattttttgtttgcccactcactggtgcgttgaat 1029
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7404
Number of Sequences: 1807
Number of extensions: 7404
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)